AQS63481.1 protein (Agrobacterium rhizogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS61348.1	AQS63481.1	B0909_03010	B0909_13875	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
AQS61348.1	AQS63482.1	B0909_03010	B0909_13880	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
AQS61348.1	fbpC	B0909_03010	B0909_13865	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.861
AQS62760.1	AQS63481.1	B0909_11405	B0909_13875	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AQS62760.1	AQS63482.1	B0909_11405	B0909_13880	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AQS62760.1	fbpC	B0909_11405	B0909_13865	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.839
AQS62861.1	AQS63480.1	B0909_11970	B0909_13870	Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
AQS62861.1	AQS63481.1	B0909_11970	B0909_13875	Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
AQS62861.1	AQS63482.1	B0909_11970	B0909_13880	Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
AQS63480.1	AQS62861.1	B0909_13870	B0909_11970	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
AQS63480.1	AQS63481.1	B0909_13870	B0909_13875	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AQS63480.1	AQS63482.1	B0909_13870	B0909_13880	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AQS63480.1	AQS63484.1	B0909_13870	B0909_13890	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
AQS63480.1	fbpC	B0909_13870	B0909_13865	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.992
AQS63481.1	AQS61348.1	B0909_13875	B0909_03010	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
AQS63481.1	AQS62760.1	B0909_13875	B0909_11405	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AQS63481.1	AQS62861.1	B0909_13875	B0909_11970	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
AQS63481.1	AQS63480.1	B0909_13875	B0909_13870	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AQS63481.1	AQS63482.1	B0909_13875	B0909_13880	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.546
AQS63481.1	AQS63484.1	B0909_13875	B0909_13890	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459

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