Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQS65207.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
AQS63715.1
Hydrophobe/amphiphile efflux-1 family RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
AQS64189.1
Hydrophobe/amphiphile efflux-1 family RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.968
AQS61307.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.904
AQS63581.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
AQS61001.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.884
AQS60921.1
Hydrophobe/amphiphile efflux-1 family RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.834
MacB
Macrolide ABC transporter permease/ATP-binding protein MacB; With MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.811
MacB-2
Macrolide ABC transporter permease/ATP-binding protein MacB; With MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.786
AQS64955.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.609
B0909_17985
Cell wall anchor protein; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.567
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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