AQS63779.1 protein (Agrobacterium rhizogenes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS63773.1	AQS63775.1	B0909_15525	B0909_15540	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AQS63773.1	AQS63776.1	B0909_15525	B0909_15545	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
AQS63773.1	AQS63777.1	B0909_15525	B0909_15550	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
AQS63773.1	AQS63779.1	B0909_15525	B0909_15560	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
AQS63773.1	AQS65214.1	B0909_15525	B0909_15530	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.	0.916
AQS63775.1	AQS63773.1	B0909_15540	B0909_15525	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AQS63775.1	AQS63776.1	B0909_15540	B0909_15545	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
AQS63775.1	AQS63777.1	B0909_15540	B0909_15550	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
AQS63775.1	AQS63778.1	B0909_15540	B0909_15555	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
AQS63775.1	AQS63779.1	B0909_15540	B0909_15560	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AQS63775.1	AQS65018.1	B0909_15540	B0909_22745	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AQS63775.1	AQS65019.1	B0909_15540	B0909_22750	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
AQS63775.1	AQS65214.1	B0909_15540	B0909_15530	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.	0.729
AQS63775.1	AQS65371.1	B0909_15540	B0909_22770	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
AQS63776.1	AQS63773.1	B0909_15545	B0909_15525	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
AQS63776.1	AQS63775.1	B0909_15545	B0909_15540	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
AQS63776.1	AQS63777.1	B0909_15545	B0909_15550	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
AQS63776.1	AQS63778.1	B0909_15545	B0909_15555	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
AQS63776.1	AQS63779.1	B0909_15545	B0909_15560	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
AQS63776.1	AQS65019.1	B0909_15545	B0909_22750	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865

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