Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NapANitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (834 aa)    
Predicted Functional Partners:
AQS63832.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AQS63831.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
AQS63835.1
Ferredoxin-type protein NapF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.986
AQS63834.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.984
NirK
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.976
AQS64287.1
Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.970
CcoP
Cytochrome-c oxidase, cbb3-type subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
AQS64290.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
0.920
nirD
Nitrite reductase (NAD(P)H) small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.915
AQS64284.1
Bicarbonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.902
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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