Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQS64538.1General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
WrbA
NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.628
GlpK
Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.605
AQS62454.1
CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.587
AQS64539.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
AQS60993.1
Urease operon accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.525
AQS64126.1
DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.507
AQS64027.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
AQS61204.1
Putative DNA modification/repair radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
B0909_02275
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
AQS64558.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.