AQS64884.1 protein (Agrobacterium rhizogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AQS64884.1

Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)

Predicted Functional Partners:

AQS64885.1

0.962

AQS65351.1

0.962

AQS64462.1

0.935

AQS64786.1

0.896

AQS64405.1

0.888

AQS63658.1

0.833

AQS64397.1

0.827

AQS64398.1

0.826

AQS63659.1

0.823

AQS64404.1

0.821

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS63658.1	AQS63659.1	B0909_14845	B0909_14850	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
AQS63658.1	AQS64398.1	B0909_14845	B0909_19140	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AQS63658.1	AQS64884.1	B0909_14845	B0909_21975	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
AQS63658.1	AQS64885.1	B0909_14845	B0909_21980	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
AQS63659.1	AQS63658.1	B0909_14850	B0909_14845	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
AQS63659.1	AQS64884.1	B0909_14850	B0909_21975	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
AQS64397.1	AQS64398.1	B0909_19135	B0909_19140	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
AQS64397.1	AQS64884.1	B0909_19135	B0909_21975	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AQS64397.1	AQS64885.1	B0909_19135	B0909_21980	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
AQS64398.1	AQS63658.1	B0909_19140	B0909_14845	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AQS64398.1	AQS64397.1	B0909_19140	B0909_19135	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
AQS64398.1	AQS64884.1	B0909_19140	B0909_21975	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
AQS64404.1	AQS64405.1	B0909_19170	B0909_19175	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AQS64404.1	AQS64884.1	B0909_19170	B0909_21975	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
AQS64404.1	AQS64885.1	B0909_19170	B0909_21980	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.401
AQS64405.1	AQS64404.1	B0909_19175	B0909_19170	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AQS64405.1	AQS64884.1	B0909_19175	B0909_21975	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
AQS64405.1	AQS64885.1	B0909_19175	B0909_21980	Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
AQS64462.1	AQS64884.1	B0909_19495	B0909_21975	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
AQS64786.1	AQS64884.1	B0909_21435	B0909_21975	Type I secretion system permease/ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896

page 1 of 2

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About