AQS65033.1 protein (Agrobacterium rhizogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS60832.1	AQS60834.1	B0909_00010	B0909_00020	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AQS60832.1	AQS64218.1	B0909_00010	B0909_18105	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AQS60832.1	AQS65033.1	B0909_00010	B0909_22840	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
AQS60832.1	AQS65374.1	B0909_00010	B0909_22845	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AQS60834.1	AQS60832.1	B0909_00020	B0909_00010	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AQS60834.1	AQS64218.1	B0909_00020	B0909_18105	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AQS60834.1	AQS64588.1	B0909_00020	B0909_20255	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
AQS60834.1	AQS65033.1	B0909_00020	B0909_22840	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.644
AQS60834.1	AQS65034.1	B0909_00020	B0909_22850	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AQS60834.1	AQS65374.1	B0909_00020	B0909_22845	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
AQS60904.1	AQS65033.1	B0909_00410	B0909_22840	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
AQS60904.1	AQS65034.1	B0909_00410	B0909_22850	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AQS60904.1	AQS65374.1	B0909_00410	B0909_22845	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AQS64218.1	AQS60832.1	B0909_18105	B0909_00010	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AQS64218.1	AQS60834.1	B0909_18105	B0909_00020	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AQS64218.1	AQS64588.1	B0909_18105	B0909_20255	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AQS64218.1	AQS65033.1	B0909_18105	B0909_22840	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
AQS64218.1	AQS65034.1	B0909_18105	B0909_22850	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AQS64218.1	AQS65374.1	B0909_18105	B0909_22845	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
AQS64588.1	AQS60834.1	B0909_20255	B0909_00020	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712

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