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CN09_00295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00295" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_00295ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)    
Predicted Functional Partners:
CN09_00280
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (504 aa)
 
  0.994
CN09_00290
Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
  0.990
CN09_00300
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S33 family (296 aa)
 
          0.947
CN09_00305
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
          0.918
CN09_00285
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (569 aa)
 
 
 
  0.888
CN09_20615
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
  0.761
CN09_33460
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
  0.759
CN09_26415
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
 
  0.753
CN09_19120
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
  0.753
CN09_33290
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
  0.751
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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