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CN09_00605 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00605" - Peptide ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_00605Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)    
Predicted Functional Partners:
CN09_00610
Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
   
  0.978
CN09_00595
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (349 aa)
 
  0.965
CN09_00600
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
0.961
CN09_00590
Isochorismatase; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
              0.848
CN09_01065
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
  0.831
CN09_15830
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
  0.829
CN09_20695
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
 
  0.825
CN09_31960
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
  0.824
CN09_33365
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
  0.821
CN09_12765
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
 
  0.811
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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