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CN09_01190 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01190" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01190Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)    
Predicted Functional Partners:
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
              0.999
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (259 aa)
              0.893
CN09_01195
6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
 
          0.888
CN09_27580
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
   
          0.709
ctaG
Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (204 aa)
 
          0.698
CN09_09835
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)
   
          0.635
CN09_14535
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
 
          0.623
CN09_27485
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (919 aa)
   
          0.618
CN09_06795
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1139 aa)
   
          0.591
CN09_16885
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
   
          0.590
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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