CN09_01190 protein (Agrobacterium rhizogenes)

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Score

CN09_01190

Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)

Predicted Functional Partners:

putA

0.999

nth

0.893

CN09_01195

0.888

CN09_27580

0.709

ctaG

0.698

CN09_09835

0.635

CN09_14535

0.623

CN09_27485

0.618

CN09_06795

0.591

CN09_16885

0.590

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01190	CN09_01195	CN09_01190	CN09_01195	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.888
CN09_01190	CN09_06795	CN09_01190	CN09_06795	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.591
CN09_01190	CN09_09835	CN09_01190	CN09_09835	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.635
CN09_01190	CN09_14535	CN09_01190	CN09_14535	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_01190	CN09_16885	CN09_01190	CN09_16885	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.590
CN09_01190	CN09_27485	CN09_01190	CN09_27485	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.618
CN09_01190	CN09_27580	CN09_01190	CN09_27580	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.709
CN09_01190	ctaG	CN09_01190	CN09_16850	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I	0.698
CN09_01190	nth	CN09_01190	CN09_01185	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate	0.893
CN09_01190	putA	CN09_01190	CN09_23575	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family	0.999
CN09_01195	CN09_01190	CN09_01195	CN09_01190	6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.888
CN09_01195	nth	CN09_01195	CN09_01185	6-O-methylguanine DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate	0.879
CN09_06795	CN09_01190	CN09_06795	CN09_01190	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.591
CN09_06795	CN09_27485	CN09_06795	CN09_27485	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.567
CN09_06795	CN09_27580	CN09_06795	CN09_27580	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.753
CN09_09835	CN09_01190	CN09_09835	CN09_01190	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.635
CN09_09835	ctaG	CN09_09835	CN09_16850	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I	0.455
CN09_14535	CN09_01190	CN09_14535	CN09_01190	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_14535	CN09_27485	CN09_14535	CN09_27485	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.632
CN09_14535	CN09_27580	CN09_14535	CN09_27580	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.706

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