CN09_01210 protein (Agrobacterium rhizogenes)

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Score

CN09_01210

LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology (329 aa)

Predicted Functional Partners:

CN09_03380

0.710

tal

0.636

CN09_01215

0.544

KEA03743.1

0.433

CN09_29715

0.433

CN09_20125

0.421

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01210	CN09_01215	CN09_01210	CN09_01215	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.544
CN09_01210	CN09_03380	CN09_01210	CN09_03380	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.710
CN09_01210	CN09_20125	CN09_01210	CN09_20125	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.421
CN09_01210	CN09_29715	CN09_01210	CN09_34620	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.433
CN09_01210	KEA03743.1	CN09_01210	CN09_29715	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Derived by automated computational analysis using gene prediction method: Protein Homology	0.433
CN09_01210	tal	CN09_01210	CN09_01220	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	0.636
CN09_01215	CN09_01210	CN09_01215	CN09_01210	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.544
CN09_01215	tal	CN09_01215	CN09_01220	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	0.845
CN09_03380	CN09_01210	CN09_03380	CN09_01210	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.710
CN09_03380	tal	CN09_03380	CN09_01220	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	0.608
CN09_20125	CN09_01210	CN09_20125	CN09_01210	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.421
CN09_20125	CN09_29715	CN09_20125	CN09_34620	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.974
CN09_20125	KEA03743.1	CN09_20125	CN09_29715	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Derived by automated computational analysis using gene prediction method: Protein Homology	0.974
CN09_29715	CN09_01210	CN09_34620	CN09_01210	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.433
CN09_29715	CN09_20125	CN09_34620	CN09_20125	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.974
KEA03743.1	CN09_01210	CN09_29715	CN09_01210	Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.433
KEA03743.1	CN09_20125	CN09_29715	CN09_20125	Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.974
tal	CN09_01210	CN09_01220	CN09_01210	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.636
tal	CN09_01215	CN09_01220	CN09_01215	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.845
tal	CN09_03380	CN09_01220	CN09_03380	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.608

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