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CN09_01265 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01265" - Mandelate racemase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_01265Mandelate racemase; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)    
Predicted Functional Partners:
CN09_01270
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (109 aa)
 
     
  0.982
CN09_01280
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
        0.982
CN09_01255
Maltose ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
          0.966
CN09_01250
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
          0.965
CN09_01290
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
 
          0.946
CN09_01285
Dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
 
     
  0.923
CN09_01295
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
 
 
 
  0.906
CN09_01245
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (438 aa)
 
          0.882
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
         
  0.864
CN09_01260
Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (365 aa)
 
          0.852
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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