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CN09_01320 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01320" - Spermidine/putrescine ABC transporter permease in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_01320Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)    
Predicted Functional Partners:
CN09_01315
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
  0.995
CN09_01330
Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
 
   
  0.979
CN09_01325
Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (328 aa)
 
 
  0.973
CN09_01310
Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the aldehyde dehydrogenase family (475 aa)
 
        0.927
CN09_15830
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
  0.805
CN09_01335
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
          0.778
CN09_20695
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
 
  0.756
CN09_20700
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
   
  0.696
CN09_01050
Putrescine/spermidine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
 
   
  0.690
CN09_00600
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
  0.677
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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