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CN09_01350 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01350" - LacI family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_01350LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)    
Predicted Functional Partners:
CN09_01355
Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
          0.849
CN09_01360
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
          0.785
CN09_01365
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
 
     
  0.712
CN09_01345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (66 aa)
              0.553
CN09_20995
Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
          0.531
CN09_20990
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
 
     
  0.457
CN09_29160
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
 
     
  0.450
CN09_00240
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
     
  0.444
CN09_29850
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)
   
          0.433
CN09_23650
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
 
          0.421
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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