STRINGSTRING
CN09_01365 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01365" - Oxidoreductase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_01365Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)    
Predicted Functional Partners:
CN09_01360
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
   
  0.972
CN09_01355
Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
   
  0.905
CN09_34445
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
   
  0.808
CN09_01450
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
   
  0.785
CN09_20995
Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
   
  0.728
CN09_01350
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
 
     
  0.712
CN09_34410
Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
 
          0.672
CN09_34455
MocC; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
   
  0.650
CN09_21015
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
 
     
  0.635
CN09_11590
MocC; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
 
   
  0.616
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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