CN09_01515 protein (Agrobacterium rhizogenes)

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[Homology]

Score

CN09_01515

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology (218 aa)

Predicted Functional Partners:

CN09_01510

0.992

polA

0.716

hisI

0.652

cysS

0.652

CN09_05945

0.645

CN09_01520

0.614

CN09_11045

0.614

mdh

0.574

CN09_16525

0.568

CN09_06475

0.553

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01510	CN09_01515	CN09_01510	CN09_01515	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.992
CN09_01510	CN09_01520	CN09_01510	CN09_01520	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.670
CN09_01510	CN09_05945	CN09_01510	CN09_05945	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family	0.652
CN09_01510	cysS	CN09_01510	CN09_10820	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family	0.652
CN09_01510	hisI	CN09_01510	CN09_07080	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP	0.652
CN09_01515	CN09_01510	CN09_01515	CN09_01510	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.992
CN09_01515	CN09_01520	CN09_01515	CN09_01520	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.614
CN09_01515	CN09_05945	CN09_01515	CN09_05945	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family	0.645
CN09_01515	CN09_06475	CN09_01515	CN09_06475	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.553
CN09_01515	CN09_11045	CN09_01515	CN09_11045	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.614
CN09_01515	CN09_16525	CN09_01515	CN09_16525	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.568
CN09_01515	cysS	CN09_01515	CN09_10820	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family	0.652
CN09_01515	hisI	CN09_01515	CN09_07080	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP	0.652
CN09_01515	mdh	CN09_01515	CN09_27995	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate	0.574
CN09_01515	polA	CN09_01515	CN09_13050	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.716
CN09_01520	CN09_01510	CN09_01520	CN09_01510	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.670
CN09_01520	CN09_01515	CN09_01520	CN09_01515	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.614
CN09_05945	CN09_01510	CN09_05945	CN09_01510	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family	Nickel/cobalt efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family	0.652
CN09_05945	CN09_01515	CN09_05945	CN09_01515	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.645
CN09_05945	hisI	CN09_05945	CN09_07080	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family	Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP	0.745

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