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CN09_01535 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01535" - Cytochrome C peroxidase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_01535Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (461 aa)    
Predicted Functional Partners:
CN09_01540
Derived by automated computational analysis using gene prediction method- Protein Homology (542 aa)
 
          0.972
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
         
  0.903
CN09_13785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
         
  0.850
CN09_31570
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (697 aa)
     
 
  0.799
CN09_12115
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (200 aa)
         
  0.787
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
         
  0.777
CN09_03385
Sterol desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
 
          0.675
virG
Regulatory protein VirG; VirG is required for the positive regulation of at least two vir loci encoded by the Ri plasmid of A.rhizogenes (241 aa)
         
  0.655
CN09_17280
Phenol degradation protein meta; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
              0.652
CN09_14090
Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (519 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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