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CN09_01710 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01710" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01710Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (805 aa)    
Predicted Functional Partners:
CN09_01715
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
  0.999
CN09_01705
Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
   
  0.991
CN09_16960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
        0.989
CN09_13950
Peptidase M14; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
              0.984
CN09_02280
5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family (195 aa)
         
  0.950
CN09_14320
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
              0.950
CN09_03610
Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
   
  0.947
CN09_27040
Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
 
   
  0.938
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
              0.935
CN09_03615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
 
   
  0.931
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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