STRINGSTRING
CN09_01775 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01775" - Cation tolerance protein CutA in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01775Cation tolerance protein CutA; Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)    
Predicted Functional Partners:
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
   
   
  0.899
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (886 aa)
     
      0.763
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (274 aa)
              0.693
CN09_21195
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (732 aa)
 
 
  0.636
CN09_07195
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (619 aa)
 
 
  0.617
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
 
 
 
  0.553
CN09_19780
Regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (416 aa)
 
 
  0.549
CN09_31760
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (399 aa)
 
 
  0.525
CN09_21975
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (736 aa)
 
 
  0.520
CN09_14580
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (469 aa)
 
 
  0.519
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (10%) [HD]