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gltD protein (Agrobacterium rhizogenes) - STRING interaction network
"gltD" - Glutamate synthase is composed of subunits alpha and beta in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)    
Predicted Functional Partners:
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
 
  0.999
glnA
Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method- Protein Homology (469 aa)
   
 
  0.986
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
 
  0.959
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (389 aa)
 
 
  0.937
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
   
 
  0.933
CN09_15240
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
   
 
  0.931
CN09_04850
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamine synthetase family (456 aa)
   
 
  0.924
CN09_33945
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamine synthetase family (435 aa)
   
 
  0.924
carB
Carbamoyl-phosphate synthase large chain; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CarB family (1161 aa)
   
 
  0.922
CN09_15785
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamine synthetase family (478 aa)
   
 
  0.921
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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