CN09_01930 protein (Agrobacterium rhizogenes)

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

CN09_01930

Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (527 aa)

Predicted Functional Partners:

CN09_01825

0.815

CN09_14500

0.805

CN09_01925

0.757

ispDF

0.727

CN09_26870

0.677

CN09_15420

0.663

CN09_07755

0.584

CN09_01920

0.547

CN09_19725

0.543

CN09_01935

0.525

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01825	CN09_01920	CN09_01825	CN09_01920	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01825	CN09_01925	CN09_01825	CN09_01925	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01825	CN09_01930	CN09_01825	CN09_01930	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.815
CN09_01825	CN09_07755	CN09_01825	CN09_07755	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.578
CN09_01825	CN09_14500	CN09_01825	CN09_14500	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	0.999
CN09_01825	CN09_19725	CN09_01825	CN09_19725	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.855
CN09_01920	CN09_01825	CN09_01920	CN09_01825	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01920	CN09_01925	CN09_01920	CN09_01925	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	0.952
CN09_01920	CN09_01930	CN09_01920	CN09_01930	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.547
CN09_01925	CN09_01825	CN09_01925	CN09_01825	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01925	CN09_01920	CN09_01925	CN09_01920	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	0.952
CN09_01925	CN09_01930	CN09_01925	CN09_01930	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.757
CN09_01925	CN09_01935	CN09_01925	CN09_01935	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.582
CN09_01930	CN09_01825	CN09_01930	CN09_01825	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.815
CN09_01930	CN09_01920	CN09_01930	CN09_01920	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Aminodeoxychorismate synthase; Catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology	0.547
CN09_01930	CN09_01925	CN09_01930	CN09_01925	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method- Protein Homology	0.757
CN09_01930	CN09_01935	CN09_01930	CN09_01935	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.525
CN09_01930	CN09_07755	CN09_01930	CN09_07755	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.584
CN09_01930	CN09_14500	CN09_01930	CN09_14500	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	0.805
CN09_01930	CN09_15420	CN09_01930	CN09_15420	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.663

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