Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CN09_02140 | CN09_06040 | CN09_02140 | CN09_06040 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.960 |
CN09_02140 | CN09_10870 | CN09_02140 | CN09_10870 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.974 |
CN09_02140 | CN09_18630 | CN09_02140 | CN09_18630 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.963 |
CN09_02140 | CN09_22475 | CN09_02140 | CN09_22475 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.961 |
CN09_02140 | CN09_27270 | CN09_02140 | CN09_27270 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.961 |
CN09_02140 | CN09_33620 | CN09_02140 | CN09_33620 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.967 |
CN09_02140 | CN09_34040 | CN09_02140 | CN09_34040 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Molecular chaperone dnak; Acts as a chaperone | 0.966 |
CN09_02140 | dnaK | CN09_02140 | CN09_21890 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Molecular chaperone dnak; Acts as a chaperone | 0.967 |
CN09_02140 | glpK | CN09_02140 | CN09_03750 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.963 |
CN09_02140 | rnr | CN09_02140 | CN09_09830 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs | 0.962 |
CN09_06040 | CN09_02140 | CN09_06040 | CN09_02140 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.960 |
CN09_06040 | CN09_10870 | CN09_06040 | CN09_10870 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.942 |
CN09_06040 | CN09_27270 | CN09_06040 | CN09_27270 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.955 |
CN09_06040 | rnr | CN09_06040 | CN09_09830 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs | 0.962 |
CN09_10870 | CN09_02140 | CN09_10870 | CN09_02140 | Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.974 |
CN09_10870 | CN09_06040 | CN09_10870 | CN09_06040 | Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.942 |
CN09_18630 | CN09_02140 | CN09_18630 | CN09_02140 | annotation not available | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.963 |
CN09_18630 | CN09_33620 | CN09_18630 | CN09_33620 | annotation not available | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.985 |
CN09_18630 | CN09_34040 | CN09_18630 | CN09_34040 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.964 |
CN09_18630 | dnaK | CN09_18630 | CN09_21890 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.964 |
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