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CN09_02150 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02150" - Cag pathogenicity island protein Cag4 in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_02150Cag pathogenicity island protein Cag4; Derived by automated computational analysis using gene prediction method- Protein Homology (122 aa)    
Predicted Functional Partners:
CN09_30620
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
   
          0.626
CN09_16910
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (606 aa)
   
          0.621
CN09_30615
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (359 aa)
   
          0.610
CN09_30495
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
   
          0.592
CN09_22140
ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S14 family (295 aa)
   
          0.590
CN09_25430
Acetone carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
          0.585
CN09_20340
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
   
          0.581
CN09_05765
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
   
          0.576
CN09_25910
Peptidase M48; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
 
          0.573
CN09_02155
Regulator of CtrA degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
              0.561
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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