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tauA protein (Agrobacterium rhizogenes) - STRING interaction network
"tauA" - Taurine ABC transporter substrate-binding protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauATaurine ABC transporter substrate-binding protein; With TauB and TauC is responsible for taurine uptake; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)    
Predicted Functional Partners:
CN09_02540
Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
   
  0.996
tauB
Taurine import ATP-binding protein TauB; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family (265 aa)
 
   
  0.995
CN09_30115
Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
   
  0.938
CN09_22540
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
 
   
  0.913
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
           
  0.820
CN09_06125
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
   
  0.731
CN09_21215
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
 
   
  0.702
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates (391 aa)
 
 
  0.695
CN09_30120
Sulfonate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
   
  0.685
CN09_22440
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
   
  0.661
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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