Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CN09_02715 | CN09_02720 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.572 |
CN09_02715 | CN09_02725 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.415 |
CN09_02720 | CN09_02715 | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ | 0.572 |
CN09_02720 | CN09_02725 | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.868 |
CN09_02720 | CN09_07200 | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.565 |
CN09_02725 | CN09_02715 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ | 0.415 |
CN09_02725 | CN09_02720 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.868 |
CN09_02725 | CN09_07200 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.411 |
CN09_02725 | CN09_24755 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.637 |
CN09_07200 | CN09_02720 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.565 |
CN09_07200 | CN09_02725 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.411 |
CN09_07200 | CN09_24755 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.492 |
CN09_24755 | CN09_02725 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.637 |
CN09_24755 | CN09_07200 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.492 |