CN09_02875 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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gene neighborhood

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textmining

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protein homology

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Score

CN09_02875

Cytosine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)

Predicted Functional Partners:

CN09_02870

0.989

CN09_02865

0.976

CN09_02890

0.945

CN09_02880

0.943

CN09_02885

0.941

CN09_02900

0.757

CN09_01080

0.726

CN09_02840

0.725

CN09_13995

0.689

CN09_01075

0.670

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_01075	CN09_01080	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.937
CN09_01075	CN09_02865	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.452
CN09_01075	CN09_02870	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.759
CN09_01075	CN09_02875	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytosine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.670
CN09_01075	CN09_02880	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.544
CN09_01075	CN09_02885	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.449
CN09_01075	CN09_02890	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.599
CN09_01080	CN09_01075	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.937
CN09_01080	CN09_02870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.647
CN09_01080	CN09_02875	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytosine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.726
CN09_01080	CN09_02900	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.505
CN09_02840	CN09_02865	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.680
CN09_02840	CN09_02870	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.775
CN09_02840	CN09_02875	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytosine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.725
CN09_02840	CN09_02880	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.568
CN09_02840	CN09_02885	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.547
CN09_02840	CN09_02890	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.479
CN09_02840	CN09_02900	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.443
CN09_02865	CN09_01075	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.452
CN09_02865	CN09_02840	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.680