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CN09_02935 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02935" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_02935Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (766 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family (431 aa)
              0.859
CN09_11920
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
          0.805
CN09_08320
Sporulation protein; Derived by automated computational analysis using gene prediction method- Protein Homology (929 aa)
 
        0.791
CN09_17100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
          0.787
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
 
          0.784
CN09_06440
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (2225 aa)
   
          0.777
CN09_16990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.771
CN09_02960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)
   
          0.771
CN09_04280
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
   
          0.765
CN09_27530
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
          0.764
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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