CN09_02970 protein (Agrobacterium rhizogenes)

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

CN09_02970

Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)

Predicted Functional Partners:

CN09_15420

0.999

CN09_02965

0.925

lptD

0.752

CN09_02995

0.752

CN09_02005

0.751

CN09_07995

0.749

CN09_17555

0.743

CN09_02985

0.743

CN09_27510

0.740

CN09_16335

0.733

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02005	CN09_02965	CN09_02005	CN09_02965	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.553
CN09_02005	CN09_02970	CN09_02005	CN09_02970	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.751
CN09_02005	CN09_02985	CN09_02005	CN09_02985	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.781
CN09_02005	CN09_02995	CN09_02005	CN09_02995	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.568
CN09_02005	CN09_07995	CN09_02005	CN09_07995	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.782
CN09_02005	CN09_16335	CN09_02005	CN09_16335	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.603
CN09_02005	CN09_17555	CN09_02005	CN09_17555	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Alkaline phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.695
CN09_02005	CN09_27510	CN09_02005	CN09_27510	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cell division protein FtsX; Derived by automated computational analysis using gene prediction method- Protein Homology	0.688
CN09_02005	lptD	CN09_02005	CN09_10670	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family	0.694
CN09_02965	CN09_02005	CN09_02965	CN09_02005	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.553
CN09_02965	CN09_02970	CN09_02965	CN09_02970	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.925
CN09_02965	CN09_02985	CN09_02965	CN09_02985	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.715
CN09_02965	CN09_02995	CN09_02965	CN09_02995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.689
CN09_02965	CN09_07995	CN09_02965	CN09_07995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.738
CN09_02965	CN09_16335	CN09_02965	CN09_16335	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.720
CN09_02965	CN09_27510	CN09_02965	CN09_27510	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cell division protein FtsX; Derived by automated computational analysis using gene prediction method- Protein Homology	0.675
CN09_02965	lptD	CN09_02965	CN09_10670	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family	0.484
CN09_02970	CN09_02005	CN09_02970	CN09_02005	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.751
CN09_02970	CN09_02965	CN09_02970	CN09_02965	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.925
CN09_02970	CN09_02985	CN09_02970	CN09_02985	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.743

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