CN09_03080 protein (Agrobacterium rhizogenes)

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CN09_03080

Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (386 aa)

Predicted Functional Partners:

CN09_03075

0.996

CN09_03085

0.991

CN09_03090

0.991

CN09_03070

0.980

ureD

0.927

CN09_20495

0.891

ureA

0.886

CN09_20485

0.880

CN09_03060

0.875

ureB

0.865

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03060	CN09_03070	CN09_03060	CN09_03070	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.894
CN09_03060	CN09_03075	CN09_03060	CN09_03075	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.874
CN09_03060	CN09_03080	CN09_03060	CN09_03080	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.875
CN09_03060	CN09_03085	CN09_03060	CN09_03085	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.873
CN09_03060	CN09_03090	CN09_03060	CN09_03090	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.859
CN09_03060	ureA	CN09_03060	CN09_03100	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the urease gamma subunit family	0.731
CN09_03060	ureB	CN09_03060	CN09_03105	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease subunit beta; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem [...]	0.716
CN09_03060	ureD	CN09_03060	CN09_03095	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter	0.747
CN09_03070	CN09_03060	CN09_03070	CN09_03060	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.894
CN09_03070	CN09_03075	CN09_03070	CN09_03075	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.979
CN09_03070	CN09_03080	CN09_03070	CN09_03080	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.980
CN09_03070	CN09_03085	CN09_03070	CN09_03085	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.977
CN09_03070	CN09_03090	CN09_03070	CN09_03090	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.979
CN09_03070	CN09_20485	CN09_03070	CN09_20485	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.882
CN09_03070	CN09_20495	CN09_03070	CN09_20495	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urea ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.864
CN09_03070	ureA	CN09_03070	CN09_03100	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the urease gamma subunit family	0.878
CN09_03070	ureB	CN09_03070	CN09_03105	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease subunit beta; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem [...]	0.859
CN09_03070	ureD	CN09_03070	CN09_03095	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter	0.901
CN09_03075	CN09_03060	CN09_03075	CN09_03060	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.874
CN09_03075	CN09_03070	CN09_03075	CN09_03070	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.979

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