CN09_03530 protein (Agrobacterium rhizogenes)

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Score

CN09_03530

Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family (442 aa)

Predicted Functional Partners:

CN09_03525

0.965

CN09_03535

0.908

CN09_03570

0.743

CN09_23355

0.733

CN09_03565

0.716

CN09_03540

0.582

xylA

0.577

CN09_07600

0.568

CN09_07595

0.559

CN09_29865

0.559

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03525	CN09_03530	CN09_03525	CN09_03530	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.965
CN09_03525	CN09_03535	CN09_03525	CN09_03535	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.860
CN09_03525	CN09_03540	CN09_03525	CN09_03540	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_03525	CN09_23355	CN09_03525	CN09_23355	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.505
CN09_03525	xylA	CN09_03525	CN09_01420	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology	0.472
CN09_03530	CN09_03525	CN09_03530	CN09_03525	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.965
CN09_03530	CN09_03535	CN09_03530	CN09_03535	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.908
CN09_03530	CN09_03540	CN09_03530	CN09_03540	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.582
CN09_03530	CN09_03565	CN09_03530	CN09_03565	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.716
CN09_03530	CN09_03570	CN09_03530	CN09_03570	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.743
CN09_03530	CN09_07595	CN09_03530	CN09_07595	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.559
CN09_03530	CN09_07600	CN09_03530	CN09_07600	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.568
CN09_03530	CN09_23355	CN09_03530	CN09_23355	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.733
CN09_03530	CN09_29865	CN09_03530	CN09_29865	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.559
CN09_03530	xylA	CN09_03530	CN09_01420	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology	0.577
CN09_03535	CN09_03525	CN09_03535	CN09_03525	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.860
CN09_03535	CN09_03530	CN09_03535	CN09_03530	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.908
CN09_03535	CN09_03540	CN09_03535	CN09_03540	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.733
CN09_03535	CN09_03570	CN09_03535	CN09_03570	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.642
CN09_03535	CN09_07600	CN09_03535	CN09_07600	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.479

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