CN09_03835 protein (Agrobacterium rhizogenes)

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CN09_03835

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)

Predicted Functional Partners:

CN09_30500

0.726

CN09_16910

0.707

CN09_22215

0.701

CN09_30615

0.690

CN09_22140

0.688

CN09_30620

0.682

CN09_05765

0.676

CN09_25910

0.658

CN09_20395

0.657

CN09_30495

0.653

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_03835	CN09_05765	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.676
CN09_03835	CN09_16910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.707
CN09_03835	CN09_20395	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease-associated protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.657
CN09_03835	CN09_22140	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S14 family	0.688
CN09_03835	CN09_22215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method- Protein Homology	0.701
CN09_03835	CN09_25910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase M48; Derived by automated computational analysis using gene prediction method- Protein Homology	0.658
CN09_03835	CN09_30495	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.653
CN09_03835	CN09_30500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.726
CN09_03835	CN09_30615	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.690
CN09_03835	CN09_30620	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.682
CN09_05765	CN09_03835	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.676
CN09_05765	CN09_16910	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.786
CN09_05765	CN09_20395	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Urease-associated protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.737
CN09_05765	CN09_22140	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S14 family	0.778
CN09_05765	CN09_22215	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method- Protein Homology	0.736
CN09_05765	CN09_25910	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase M48; Derived by automated computational analysis using gene prediction method- Protein Homology	0.774
CN09_05765	CN09_30495	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.802
CN09_05765	CN09_30500	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.849
CN09_05765	CN09_30615	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.771
CN09_05765	CN09_30620	Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.766