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CN09_03975 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03975" - Cation transporter in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_03975Cation transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (740 aa)    
Predicted Functional Partners:
CN09_03280
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (398 aa)
   
 
  0.963
CN09_03260
Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
   
  0.919
CN09_02375
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
 
  0.905
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system (263 aa)
 
   
  0.881
CN09_03265
Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
   
  0.875
CN09_02380
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
   
   
  0.858
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
         
  0.857
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.801
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
           
  0.769
CN09_29270
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (619 aa)
   
   
  0.705
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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