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CN09_04555 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04555" - AraC family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_04555AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)    
Predicted Functional Partners:
CN09_04560
tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)
 
          0.765
CN09_04550
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
              0.702
CN09_05160
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
   
  0.656
CN09_16290
DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
              0.640
CN09_14830
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
 
          0.635
CN09_16975
Peptidase M16; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M16 family (432 aa)
              0.628
CN09_06545
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
          0.605
CN09_13980
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
         
  0.582
CN09_14115
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
   
        0.573
CN09_27750
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
   
          0.538
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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