CN09_04590 protein (Agrobacterium rhizogenes)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_04590

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)

Predicted Functional Partners:

CN09_15085

0.773

CN09_03555

0.765

CN09_27280

0.764

CN09_10445

0.764

CN09_14760

0.762

CN09_27530

0.740

CN09_05155

0.735

CN09_11910

0.734

CN09_10585

0.733

CN09_15515

0.728

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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Browse interactions in tabular form:

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node1	node2	node1 annotation	node2 annotation	score
CN09_03555	CN09_04590	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.765
CN09_03555	CN09_05155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.686
CN09_03555	CN09_10445	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.701
CN09_03555	CN09_10585	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.507
CN09_03555	CN09_11910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.703
CN09_03555	CN09_14760	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.769
CN09_03555	CN09_15085	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.776
CN09_03555	CN09_15515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Flagellar protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_03555	CN09_27280	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.770
CN09_03555	CN09_27530	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.659
CN09_04590	CN09_03555	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.765
CN09_04590	CN09_05155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.735
CN09_04590	CN09_10445	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.764
CN09_04590	CN09_10585	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.733
CN09_04590	CN09_11910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.734
CN09_04590	CN09_14760	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.762
CN09_04590	CN09_15085	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.773
CN09_04590	CN09_15515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Flagellar protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.728
CN09_04590	CN09_27280	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.764
CN09_04590	CN09_27530	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740