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CN09_04950 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04950" - 6-aminohexanoate hydrolase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_049506-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (462 aa)    
Predicted Functional Partners:
CN09_04945
S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
         
  0.637
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.618
CN09_04940
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
         
  0.565
CN09_24085
Cardiolipin synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
         
  0.559
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.548
CN09_25840
Esterase; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
         
  0.537
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
         
  0.476
CN09_27960
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
   
          0.436
CN09_16525
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (63 aa)
 
     
  0.426
CN09_12030
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (173 aa)
 
          0.425
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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