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CN09_04980 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04980" - Lytic transglycosylase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_04980Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)    
Predicted Functional Partners:
CN09_18560
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1702 aa)
              0.848
CN09_04975
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
         
  0.773
CN09_04970
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
              0.738
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.691
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
              0.639
CN09_04985
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (397 aa)
              0.623
CN09_08270
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
 
   
  0.608
CN09_12260
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
     
  0.526
CN09_12255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
 
     
  0.506
CN09_07720
Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
          0.494
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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