Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_05115 | CN09_06320 | CN09_05115 | CN09_06320 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.448 |
| CN09_05115 | CN09_06710 | CN09_05115 | CN09_06710 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.432 |
| CN09_05115 | obgE | CN09_05115 | CN09_18000 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Gtpase cgta; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control | 0.447 |
| CN09_05115 | prmA | CN09_05115 | CN09_05140 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Ribosomal protein l11 methyltransferase; Methylates ribosomal protein L11 | 0.558 |
| CN09_05115 | proB | CN09_05115 | CN09_17995 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate | 0.728 |
| CN09_06320 | CN09_05115 | CN09_06320 | CN09_05115 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.448 |
| CN09_06710 | CN09_05115 | CN09_06710 | CN09_05115 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.432 |
| obgE | CN09_05115 | CN09_18000 | CN09_05115 | Gtpase cgta; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.447 |
| obgE | proB | CN09_18000 | CN09_17995 | Gtpase cgta; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate | 0.978 |
| prmA | CN09_05115 | CN09_05140 | CN09_05115 | Ribosomal protein l11 methyltransferase; Methylates ribosomal protein L11 | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.558 |
| proB | CN09_05115 | CN09_17995 | CN09_05115 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate | CREA protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.728 |
| proB | obgE | CN09_17995 | CN09_18000 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate | Gtpase cgta; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control | 0.978 |
