prmA protein (Agrobacterium rhizogenes) - STRING interaction network

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Score

prmA

Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (292 aa)

Predicted Functional Partners:

CN09_03985

0.999

rplK

0.980

CN09_10375

0.948

CN09_05130

0.937

rlmH

0.921

CN09_16065

0.885

CN09_08270

0.883

CN09_26785

0.850

pheT

0.847

CN09_34320

0.845

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03985	CN09_08270	CN09_03985	CN09_08270	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.414
CN09_03985	CN09_10375	CN09_03985	CN09_10375	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999
CN09_03985	CN09_16065	CN09_03985	CN09_16065	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	0.777
CN09_03985	CN09_34320	CN09_03985	CN09_34320	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.415
CN09_03985	pheT	CN09_03985	CN09_13825	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.990
CN09_03985	prmA	CN09_03985	CN09_05140	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11	0.999
CN09_05130	CN09_10375	CN09_05130	CN09_10375	Copper chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.962
CN09_05130	prmA	CN09_05130	CN09_05140	Copper chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11	0.937
CN09_08270	CN09_03985	CN09_08270	CN09_03985	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	0.414
CN09_08270	CN09_10375	CN09_08270	CN09_10375	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999
CN09_08270	CN09_34320	CN09_08270	CN09_34320	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.890
CN09_08270	pheT	CN09_08270	CN09_13825	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.999
CN09_08270	prmA	CN09_08270	CN09_05140	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11	0.883
CN09_08270	rlmH	CN09_08270	CN09_17945	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.999
CN09_10375	CN09_03985	CN09_10375	CN09_03985	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_05130	CN09_10375	CN09_05130	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Copper chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	0.962
CN09_10375	CN09_08270	CN09_10375	CN09_08270	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_16065	CN09_10375	CN09_16065	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	0.506
CN09_10375	CN09_34320	CN09_10375	CN09_34320	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.935
CN09_10375	pheT	CN09_10375	CN09_13825	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.544

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