CN09_05285 protein (Agrobacterium rhizogenes)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

CN09_05285

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)

Predicted Functional Partners:

CN09_06240

0.999

CN09_09705

0.908

CN09_05280

0.907

CN09_05275

0.879

CN09_01990

0.792

CN09_17775

0.782

CN09_17570

0.770

CN09_17575

0.768

recO

0.765

CN09_01630

0.765

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01630	CN09_01990	CN09_01630	CN09_01990	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	0.766
CN09_01630	CN09_05275	CN09_01630	CN09_05275	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.407
CN09_01630	CN09_05285	CN09_01630	CN09_05285	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.765
CN09_01630	CN09_09705	CN09_01630	CN09_09705	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method- Protein Homology	0.494
CN09_01630	CN09_17570	CN09_01630	CN09_17570	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_01630	CN09_17575	CN09_01630	CN09_17575	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	0.693
CN09_01630	CN09_17775	CN09_01630	CN09_17775	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.823
CN09_01630	recO	CN09_01630	CN09_10970	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination	0.739
CN09_01990	CN09_01630	CN09_01990	CN09_01630	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	0.766
CN09_01990	CN09_05275	CN09_01990	CN09_05275	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.458
CN09_01990	CN09_05285	CN09_01990	CN09_05285	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.792
CN09_01990	CN09_09705	CN09_01990	CN09_09705	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method- Protein Homology	0.579
CN09_01990	CN09_17570	CN09_01990	CN09_17570	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology	0.617
CN09_01990	CN09_17575	CN09_01990	CN09_17575	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	0.684
CN09_01990	CN09_17775	CN09_01990	CN09_17775	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.767
CN09_01990	recO	CN09_01990	CN09_10970	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination	0.708
CN09_05275	CN09_01630	CN09_05275	CN09_01630	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS21 family	0.407
CN09_05275	CN09_01990	CN09_05275	CN09_01990	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family	0.458
CN09_05275	CN09_05280	CN09_05275	CN09_05280	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.878
CN09_05275	CN09_05285	CN09_05275	CN09_05285	Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.879

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