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CN09_05355 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05355" - Catechol 1,2-dioxygenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_05355Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)    
Predicted Functional Partners:
CN09_05350
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
     
  0.962
CN09_05360
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
     
  0.951
CN09_05365
4-oxalomesaconate tautomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
          0.946
CN09_05320
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
     
  0.814
CN09_05315
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
 
          0.677
CN09_30980
S-adenosylmethionine- 2-demethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
     
  0.593
CN09_05340
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (349 aa)
 
          0.588
CN09_05345
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (284 aa)
 
          0.572
CN09_05335
Hemolysin III; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
          0.569
CN09_05325
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)
 
     
  0.567
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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