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CN09_05440 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05440" - Lysine transporter LysE in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_05440Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)    
Predicted Functional Partners:
CN09_05425
Acetolactate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (190 aa)
              0.725
CN09_05420
Acetolactate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (597 aa)
              0.714
CN09_04030
Benzoate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)
   
        0.660
CN09_23580
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)
         
  0.654
CN09_05470
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
              0.630
CN09_28730
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
              0.614
CN09_04340
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (158 aa)
 
          0.607
CN09_17575
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily (1187 aa)
   
   
  0.555
CN09_29460
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)
 
          0.539
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA (317 aa)
              0.538
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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