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CN09_05635 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05635" - Rrf2 family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_05635Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)    
Predicted Functional Partners:
CN09_06825
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)
   
   
  0.943
CN09_06450
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
   
   
  0.846
CN09_06860
FeS assembly scaffold SufA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HesB/IscA family (129 aa)
   
 
  0.796
rirA
Iron-responsive transcriptional regulator; Rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)
   
     
  0.775
CN09_24120
Sulfate transporter subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
 
     
  0.755
CN09_24115
Sulfate/thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
 
     
  0.723
CN09_08335
Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HesB/IscA family (110 aa)
   
 
  0.703
CN09_06830
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology (489 aa)
         
  0.698
sufC
Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
         
  0.693
cysW
Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
 
          0.690
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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