CN09_06015 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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experimentally determined

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gene neighborhood

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co-expression

protein homology

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[Homology]

Score

CN09_06015

Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (196 aa)

Predicted Functional Partners:

CN09_06020

0.854

CN09_06025

0.562

CN09_06010

0.533

CN09_06425

0.516

CN09_10585

0.515

CN09_08495

0.492

CN09_29510

0.479

CN09_10280

0.406

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_06010	CN09_06015	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.533
CN09_06010	CN09_06020	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.552
CN09_06015	CN09_06010	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.533
CN09_06015	CN09_06020	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.854
CN09_06015	CN09_06025	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.562
CN09_06015	CN09_06425	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.516
CN09_06015	CN09_08495	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.492
CN09_06015	CN09_10280	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.406
CN09_06015	CN09_10585	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.515
CN09_06015	CN09_29510	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.479
CN09_06020	CN09_06010	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.552
CN09_06020	CN09_06015	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.854
CN09_06020	CN09_06025	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.487
CN09_06025	CN09_06015	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.562
CN09_06025	CN09_06020	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.487
CN09_06025	CN09_10280	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.532
CN09_06025	CN09_10585	Extensin; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.561
CN09_06425	CN09_06015	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.516
CN09_06425	CN09_10280	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.423
CN09_06425	CN09_10585	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.616