CN09_06065 protein (Agrobacterium rhizogenes)

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Score

CN09_06065

Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)

Predicted Functional Partners:

ribB

0.976

cobS

0.966

CN09_06070

0.933

CN09_10375

0.882

cobT

0.874

tmk

0.751

CN09_07330

0.744

CN09_07325

0.744

CN09_07310

0.744

CN09_06090

0.733

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06065	CN09_06070	CN09_06065	CN09_06070	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.933
CN09_06065	CN09_06090	CN09_06065	CN09_06090	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.733
CN09_06065	CN09_07310	CN09_06065	CN09_07310	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_06065	CN09_07325	CN09_06065	CN09_07325	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_06065	CN09_07330	CN09_06065	CN09_07330	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_06065	CN09_10375	CN09_06065	CN09_10375	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.882
CN09_06065	cobS	CN09_06065	CN09_06075	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family	0.966
CN09_06065	cobT	CN09_06065	CN09_06080	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)	0.874
CN09_06065	ribB	CN09_06065	CN09_16765	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.976
CN09_06065	tmk	CN09_06065	CN09_07305	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	0.751
CN09_06070	CN09_06065	CN09_06070	CN09_06065	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.933
CN09_06070	cobS	CN09_06070	CN09_06075	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family	0.915
CN09_06070	cobT	CN09_06070	CN09_06080	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)	0.827
CN09_06090	CN09_06065	CN09_06090	CN09_06065	Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.733
CN09_07310	CN09_06065	CN09_07310	CN09_06065	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07310	CN09_07325	CN09_07310	CN09_07325	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.797
CN09_07310	CN09_07330	CN09_07310	CN09_07330	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.794
CN09_07310	tmk	CN09_07310	CN09_07305	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	0.999
CN09_07325	CN09_06065	CN09_07325	CN09_06065	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07325	CN09_07310	CN09_07325	CN09_07310	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.797

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