CN09_06215 protein (Agrobacterium rhizogenes)

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Score

CN09_06215

Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (399 aa)

Predicted Functional Partners:

CN09_06210

0.749

ruvA

0.652

CN09_07335

0.572

moaA

0.528

CN09_27615

0.463

CN09_06640

0.454

CN09_06980

0.406

purD

0.402

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06210	CN09_06215	CN09_06210	CN09_06215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.749
CN09_06210	moaA	CN09_06210	CN09_06205	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family	0.881
CN09_06215	CN09_06210	CN09_06215	CN09_06210	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.749
CN09_06215	CN09_06640	CN09_06215	CN09_06640	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_06215	CN09_06980	CN09_06215	CN09_06980	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.406
CN09_06215	CN09_07335	CN09_06215	CN09_07335	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.572
CN09_06215	CN09_27615	CN09_06215	CN09_27615	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BolA/IbaG family	0.463
CN09_06215	moaA	CN09_06215	CN09_06205	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family	0.528
CN09_06215	purD	CN09_06215	CN09_16590	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GARS family	0.402
CN09_06215	ruvA	CN09_06215	CN09_02320	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	0.652
CN09_06640	CN09_06215	CN09_06640	CN09_06215	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_06980	CN09_06215	CN09_06980	CN09_06215	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.406
CN09_07335	CN09_06215	CN09_07335	CN09_06215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.572
CN09_27615	CN09_06215	CN09_27615	CN09_06215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BolA/IbaG family	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.463
moaA	CN09_06210	CN09_06205	CN09_06210	GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
moaA	CN09_06215	CN09_06205	CN09_06215	GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.528
purD	CN09_06215	CN09_16590	CN09_06215	Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GARS family	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.402
ruvA	CN09_06215	CN09_02320	CN09_06215	Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.652

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