CN09_06480 protein (Agrobacterium rhizogenes)

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Score

CN09_06480

UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology (362 aa)

Predicted Functional Partners:

CN09_06485

0.996

CN09_06475

0.871

CN09_06490

0.869

CN09_13160

0.756

truA

0.740

CN09_01935

0.723

CN09_20865

0.722

CN09_16825

0.721

CN09_11915

0.685

CN09_07045

0.681

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01935	CN09_06480	CN09_01935	CN09_06480	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	0.723
CN09_01935	CN09_06485	CN09_01935	CN09_06485	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid regulated cytosolic protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.683
CN09_01935	CN09_07045	CN09_01935	CN09_07045	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.599
CN09_01935	CN09_11915	CN09_01935	CN09_11915	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.543
CN09_01935	CN09_13160	CN09_01935	CN09_13160	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.725
CN09_01935	CN09_16825	CN09_01935	CN09_16825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method- Protein Homology	0.495
CN09_06475	CN09_06480	CN09_06475	CN09_06480	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_06475	CN09_06485	CN09_06475	CN09_06485	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid regulated cytosolic protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.944
CN09_06475	CN09_06490	CN09_06475	CN09_06490	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.545
CN09_06480	CN09_01935	CN09_06480	CN09_01935	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.723
CN09_06480	CN09_06475	CN09_06480	CN09_06475	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_06480	CN09_06485	CN09_06480	CN09_06485	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid regulated cytosolic protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.996
CN09_06480	CN09_06490	CN09_06480	CN09_06490	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.869
CN09_06480	CN09_07045	CN09_06480	CN09_07045	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.681
CN09_06480	CN09_11915	CN09_06480	CN09_11915	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_06480	CN09_13160	CN09_06480	CN09_13160	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.756
CN09_06480	CN09_16825	CN09_06480	CN09_16825	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method- Protein Homology	0.721
CN09_06480	CN09_20865	CN09_06480	CN09_20865	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.722
CN09_06480	truA	CN09_06480	CN09_14750	UPF0283 membrane protein CN09_06480; Derived by automated computational analysis using gene prediction method- Protein Homology	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	0.740
CN09_06485	CN09_01935	CN09_06485	CN09_01935	Amino acid regulated cytosolic protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.683

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