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CN09_06545 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06545" - AraC family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_06545AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)    
Predicted Functional Partners:
CN09_01390
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
 
 
0.925
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
         
  0.707
CN09_13785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
              0.685
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (886 aa)
              0.630
CN09_04555
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
          0.605
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (361 aa)
     
 
  0.529
CN09_19850
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
 
     
  0.518
CN09_34320
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
 
 
  0.492
CN09_28905
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
     
  0.485
CN09_26325
Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NadC/ModD family (285 aa)
              0.483
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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