CN09_06545 protein (Agrobacterium rhizogenes)

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Score

CN09_06545

AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)

Predicted Functional Partners:

CN09_01390

0.925

CN09_16300

0.707

CN09_13785

0.685

alaS

0.630

CN09_04555

0.605

recA

0.529

CN09_19850

0.518

CN09_34320

0.492

CN09_28905

0.485

CN09_26325

0.483

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01390	CN09_04555	CN09_01390	CN09_04555	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.536
CN09_01390	CN09_06545	CN09_01390	CN09_06545	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.925
CN09_01390	CN09_16300	CN09_01390	CN09_16300	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.624
CN09_01390	CN09_19850	CN09_01390	CN09_19850	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.572
CN09_01390	CN09_28905	CN09_01390	CN09_28905	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.670
CN09_01390	CN09_34320	CN09_01390	CN09_34320	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.766
CN09_04555	CN09_01390	CN09_04555	CN09_01390	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.536
CN09_04555	CN09_06545	CN09_04555	CN09_06545	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.605
CN09_06545	CN09_01390	CN09_06545	CN09_01390	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.925
CN09_06545	CN09_04555	CN09_06545	CN09_04555	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.605
CN09_06545	CN09_13785	CN09_06545	CN09_13785	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_06545	CN09_16300	CN09_06545	CN09_16300	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.707
CN09_06545	CN09_19850	CN09_06545	CN09_19850	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.518
CN09_06545	CN09_26325	CN09_06545	CN09_26325	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NadC/ModD family	0.483
CN09_06545	CN09_28905	CN09_06545	CN09_28905	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.485
CN09_06545	CN09_34320	CN09_06545	CN09_34320	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.492
CN09_06545	alaS	CN09_06545	CN09_06540	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	0.630
CN09_06545	recA	CN09_06545	CN09_06535	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	0.529
CN09_13785	CN09_06545	CN09_13785	CN09_06545	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_13785	CN09_26325	CN09_13785	CN09_26325	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the NadC/ModD family	0.604

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