CN09_06965 protein (Agrobacterium rhizogenes)

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gene neighborhood

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textmining

co-expression

protein homology

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Score

CN09_06965

Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)

Predicted Functional Partners:

CN09_10400

0.722

CN09_05730

0.709

CN09_04630

0.707

CN09_14180

0.696

CN09_04380

0.696

CN09_03935

0.680

CN09_05725

0.667

CN09_03645

0.662

CN09_04435

0.660

CN09_04440

0.656

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_03645	CN09_03935	Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.449
CN09_03645	CN09_05725	Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.839
CN09_03645	CN09_05730	Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.844
CN09_03645	CN09_06965	Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.662
CN09_03935	CN09_03645	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.449
CN09_03935	CN09_04435	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.746
CN09_03935	CN09_04440	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.538
CN09_03935	CN09_04630	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Repressor; Derived by automated computational analysis using gene prediction method- Protein Homology	0.753
CN09_03935	CN09_05725	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.450
CN09_03935	CN09_05730	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.407
CN09_03935	CN09_06965	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.680
CN09_03935	CN09_14180	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.674
CN09_04380	CN09_06965	Aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.696
CN09_04380	CN09_10400	Aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.715
CN09_04435	CN09_03935	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.746
CN09_04435	CN09_04440	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.954
CN09_04435	CN09_04630	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Repressor; Derived by automated computational analysis using gene prediction method- Protein Homology	0.775
CN09_04435	CN09_06965	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.660
CN09_04435	CN09_14180	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.602
CN09_04440	CN09_03935	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.538