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CN09_07050 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_07050" - Proline iminopeptidase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_07050Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S33 family (320 aa)    
Predicted Functional Partners:
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.769
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ (254 aa)
              0.726
CN09_32490
Pyrroloquinoline quinone biosynthesis protein PqqD; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
              0.723
pqqE
Coenzyme PQQ synthesis protein E; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the radical SAM superfamily. PqqE family (374 aa)
              0.723
CN09_07055
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
              0.648
pqqB
Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm (302 aa)
              0.623
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.524
CN09_07060
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
              0.442
CN09_29380
Metalloprotease; Derived by automated computational analysis using gene prediction method- Protein Homology (535 aa)
              0.422
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (743 aa)
              0.408
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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