CN09_07545 protein (Agrobacterium rhizogenes)

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protein homology

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Score

CN09_07545

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)

Predicted Functional Partners:

CN09_06240

0.999

mfd

0.998

putA

0.949

CN09_28015

0.877

recG

0.873

CN09_28010

0.801

rplP

0.784

CN09_14630

0.740

CN09_15290

0.739

CN09_28020

0.723

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06240	CN09_07545	CN09_06240	CN09_07545	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06240	CN09_28010	CN09_06240	CN09_28010	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family	0.999
CN09_06240	CN09_28015	CN09_06240	CN09_28015	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Succinate dehydrogenase flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FAD-depe [...]	0.999
CN09_06240	CN09_28020	CN09_06240	CN09_28020	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06240	recG	CN09_06240	CN09_07550	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA)	0.921
CN09_06240	rplP	CN09_06240	CN09_08860	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	0.939
CN09_07545	CN09_06240	CN09_07545	CN09_06240	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.999
CN09_07545	CN09_14630	CN09_07545	CN09_14630	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740
CN09_07545	CN09_15290	CN09_07545	CN09_15290	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.739
CN09_07545	CN09_28010	CN09_07545	CN09_28010	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family	0.801
CN09_07545	CN09_28015	CN09_07545	CN09_28015	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FAD-depe [...]	0.877
CN09_07545	CN09_28020	CN09_07545	CN09_28020	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.723
CN09_07545	mfd	CN09_07545	CN09_07540	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	0.998
CN09_07545	putA	CN09_07545	CN09_23575	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family	0.949
CN09_07545	recG	CN09_07545	CN09_07550	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA)	0.873
CN09_07545	rplP	CN09_07545	CN09_08860	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	0.784
CN09_14630	CN09_07545	CN09_14630	CN09_07545	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740
CN09_14630	CN09_28010	CN09_14630	CN09_28010	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family	0.652
CN09_14630	CN09_28015	CN09_14630	CN09_28015	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FAD-depe [...]	0.665
CN09_14630	CN09_28020	CN09_14630	CN09_28020	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.606

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